PaperBLAST – Find papers about a protein or its homologs

 

Clusters of Characterized Proteins

Searching for 3-isopropylmalate dehydratase large subunit as complete word(s)

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Found 6 characterized proteins with matching descriptions. 5 of these are heteromeric.

Fetched 6 sequences

Running BLASTp

Found similarities, at above 30% identity and 75% coverage, for 5 of these sequences

Found 1 clusters of similar sequences. Another 1 sequences are not clustered. Download as table or as draft rules or view by organism

Cluster 1 466-509 amino acids (heteromeric)

The first sequence in each cluster is the seed.

b0072 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli K-12 substr. MG1655
P0A6A6 3-isopropylmalate dehydratase subunit LeuC (EC 4.2.1.33) from Escherichia coli (strain K12)
ECOCYC|LEUC-MONOMER 3-isopropylmalate dehydratase large subunit; EC 4.2.1.33 from Escherichia coli K12
PFams: Aconitase
Heteromeric, 466 amino acids: PaperBLAST, CDD, Compare to cluster

Q94AR8 isopropylmalate isomerase large subunit (EC 4.2.1.33) from Arabidopsis thaliana
LEUC_ARATH / Q94AR8 3-isopropylmalate dehydratase large subunit, chloroplastic; AtLEUC; Isopropylmalate isomerase large subunit 1; AtIIL1; IPMI LSU1; EC 4.2.1.33 from Arabidopsis thaliana (Mouse-ear cress)
Q94AR8 2-(omega-methylthio)alkylmalate dehydratase (subunit 2/2) (EC 4.2.1.170); 3-isopropylmalate dehydratase (EC 4.2.1.33) from Arabidopsis thaliana
PFams: Aconitase
Heteromeric, 509 amino acids: PaperBLAST, CDD, Compare to cluster

LEUC1_SALTY / P15717 3-isopropylmalate dehydratase large subunit 1; Alpha-IPM isomerase 1; IPMI 1; Isopropylmalate isomerase 1; EC 4.2.1.33 from Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
PFams: Aconitase
Heteromeric, 466 amino acids: PaperBLAST, CDD, Compare to cluster

LEUC_CORGL / P58946 3-isopropylmalate dehydratase large subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33 from Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025)
PFams: Aconitase
Heteromeric, 481 amino acids: PaperBLAST, CDD, Compare to cluster

LEUC_MYCBO / Q7TXH6 3-isopropylmalate dehydratase large subunit; Alpha-IPM isomerase; IPMI; Isopropylmalate isomerase; EC 4.2.1.33 from Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
PFams: Aconitase
Heteromeric, 473 amino acids: PaperBLAST, CDD, Compare to cluster

Singletons (0/1 heteromeric)

GLOJ_GLAL2 / S3E7P8 3-isopropylmalate dehydratase large subunit gloJ; L-homotyrosine biosynthesis sub-cluster protein gloJ; Pneumocandin biosynthesis cluster protein J; EC 4.2.1.33 from Glarea lozoyensis (strain ATCC 20868 / MF5171)
PFams: Aconitase, Aconitase_C
880 amino acids: PaperBLAST, CDD